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|
Samples
|
Clean_reads
|
rRNA
|
snRNA
|
snoRNA
|
tRNA
|
Repbase
|
Unannotated
|
|---|
|
Ov1A
|
12,683,518 (100.00%)
|
2,656,487 (20.94%)
|
0 (0.00%)
|
4189 (0.03%)
|
49,625 (0.39%)
|
6701 (0.05%)
|
9,966,516 (78.58%)
|
|
Ov1B
|
12,527,184 (100.00%)
|
2,775,092 (22.15%)
|
1 (0.00%)
|
4228 (0.03%)
|
44,277 (0.35%)
|
6702 (0.05%)
|
9,696,884 (77.41%)
|
|
Ov1C
|
11,141,617 (100.00%)
|
3,637,501 (32.65%)
|
0 (0.00%)
|
4091 (0.04%)
|
40,670 (0.37%)
|
6319 (0.06%)
|
7,453,036 (66.89%)
|
|
Ov2A
|
17,229,692 (100.00%)
|
3,935,661 (22.84%)
|
0 (0.00%)
|
42,156 (0.24%)
|
430,011 (2.50%)
|
15,635 (0.09%)
|
12,806,229 (74.33%)
|
|
Ov2B
|
12,897,793 (100.00%)
|
2,731,975 (21.18%)
|
2 (0.00%)
|
39,227 (0.30%)
|
305,727 (2.37%)
|
19,391 (0.15%)
|
9,801,471 (75.99%)
|
|
Ov2C
|
21,644,782 (100.00%)
|
4,207,691 (19.44%)
|
0 (0.00%)
|
50,788 (0.23%)
|
404,254 (1.87%)
|
18,606 (0.09%)
|
16,963,443 (78.37%)
|
|
Ov3A
|
12,505,770 (100.00%)
|
3,726,345 (29.80%)
|
0 (0.00%)
|
2458 (0.02%)
|
131,987 (1.06%)
|
5250 (0.04%)
|
8,639,730 (69.09%)
|
|
Ov3B
|
11,035,759 (100.00%)
|
2,947,478 (26.71%)
|
1 (0.00%)
|
1340 (0.01%)
|
179,619 (1.63%)
|
2090 (0.02%)
|
7,905,231 (71.63%)
|
|
Ov3C
|
11,951,583 (100.00%)
|
2,187,876 (18.31%)
|
0 (0.00%)
|
1583 (0.01%)
|
174,552 (1.46%)
|
3021 (0.03%)
|
9,584,551 (80.19%)
|
|
Ov4A
|
13,367,757 (100.00%)
|
4,844,278 (36.24%)
|
0 (0.00%)
|
1191 (0.01%)
|
144,594 (1.08%)
|
2226 (0.02%)
|
8,375,468 (62.65%)
|
|
Ov4B
|
14,629,060 (100.00%)
|
6,913,343 (47.26%)
|
2 (0.00%)
|
2142 (0.01%)
|
107,481 (0.73%)
|
3720 (0.03%)
|
7,602,372 (51.97%)
|
|
Ov4C
|
13,162,553 (100.00%)
|
5,559,768 (42.24%)
|
0 (0.00%)
|
2637 (0.02%)
|
114,188 (0.87%)
|
10,763 (0.08%)
|
7,475,197 (56.79%)
|
|
Total
|
164,777,068 (100%)
|
46,123,495 (27.99%)
|
6 (0.00%)
|
156,030 (0.09%)
|
2,126,985 (1.29%)
|
100,424 (0.06%)
|
116,270,128 (70.56%)
|
- Note: snRNA small nuclear RNA; snoRNA small nucleolar RNA; Repbase repetitive elements database; unannotated, reads without match
